species:   Drmel
pid:       MI0028920
parent:    dme-mir-9371
paralog:   
locus:     NT_033777.3:9989120-9989180
matures:   ['AAAUCACUUUGCUUGGAAUUCA', 'AAUUCAUCACGAAGUGGUUUCU']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033777.3:9989120-9989180

6 out of bounds
71 alignments
71 proper strand
71 stranded perfect matches

**********************              ************************ 
AAAUCACUUUGCUUGGAAUUCACAUUGAUGUACGUAAGAAUUCAUCACGAAGUGGUUUCUG
(((((((((((....((((((................))))))....)))))))))))...
AAAUCACUUUGCUUGGAAUUCA--------------------------------------- l=22 a=44 c
--------------------------------------AAUUCAUCACGAAGUGGUUUCU- l=22 a=2 c*
AAAUCACUUUGCUUGGAAUUCA--------------------------------------- l=22 a=44 ma
--------------------------------------AAUUCAUCACGAAGUGGUUUCU- l=22 a=2 ma*

AAAUCACUUUGCUUGGAAUUC---------------------------------------- l=21 a=22 
AAAUCACUUUGCUUGGAAUUCA--------------------------------------- l=22 a=44 (c,ma)
--------------------------------------AAUUCAUCACGAAGUGGUU---- l=19 a=1 
--------------------------------------AAUUCAUCACGAAGUGGUUUCU- l=22 a=2 (c*,ma*)
---------------------------------------AUUCAUCACGAAGUGGUUUCU- l=21 a=2 

mb-01011
ax-1111111
ku-01
ss-111111101111
fn-111
